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Summary
EditUnder reviewWhat this benchmark meansREADME.mdPublic entries: Python and R. Passing coverage requires an installed inventory.
Goal: show how each source reference resolves: a qualified name reads its named dataset, and a bare name reads the output columns.
Input: one spec.yaml declaring two datasets. VS carries the
vital-signs records that drive the output rows: subject (USUBJID),
sequence (VSSEQ), test (VSTESTCD), result (VSSTRESN), and units
(VSSTRESU). In this example, each subject's sequence starts at 1.
DM carries one row per subject with sex, age, and race.
Bindings:
VS.USUBJID,VS.VSSEQ,VS.VSTESTCD,VS.VSSTRESN, andVS.VSSTRESUread the current vital-signs record straight through; the sequence restarts at 1 for each subject and survives intoADVSasASEQ, a key beside the subject;DM.SEX,DM.AGE, andDM.RACEreach the demographics dataset through the shared subject key, and a missing race stays blank;AGEGR1groups the already-derivedAGEinto<65and>=65; the bare name binds to the output column, never to a source dataset.
Note: a qualified reference always names the dataset it reads, so
DM and VS may carry same-named variables without colliding; a bare
name always addresses the output columns, so one column can build on
an earlier column.
Inputs
Under review2 source filesExpected output
Under review5 expected rowsexpected/advs.csv
Edit5 rows| USUBJID | ASEQ | VSTESTCD | SEX | AGE | AGEGR1 | RACE | VSSTRESN | VSSTRESU |
|---|---|---|---|---|---|---|---|---|
| 1 | SYSBP | M | 42 | <65 | WHITE | 120 | mmHg | |
| 2 | DIABP | M | 42 | <65 | WHITE | 80 | mmHg | |
| 1 | SYSBP | F | 67 | >=65 | — | 138 | mmHg | |
| 1 | SYSBP | M | 55 | <65 | ASIAN | 110 | mmHg | |
| 2 | DIABP | M | 55 | <65 | ASIAN | 70 | mmHg |
Human review and assessment
| Dataset Name | Variable Name | Variable Label | Type | Codelist/Controlled Terms | Core | Computational Method | Origin |
|---|---|---|---|---|---|---|---|
| ADVS | USUBJID | Unique Subject Identifier | character | Copy value from VS.USUBJID. | Predecessor | ||
| ADVS | ASEQ | Analysis Sequence Number | numeric | Copy value from VS.VSSEQ. | Predecessor | ||
| ADVS | VSTESTCD | Vital Signs Test Short Name | character | Copy value from VS.VSTESTCD. | Predecessor | ||
| ADVS | SEX | Sex | character | Copy value from DM.SEX. | Predecessor | ||
| ADVS | AGE | Age | numeric | Copy value from DM.AGE. | Predecessor | ||
| ADVS | AGEGR1 | Pooled Age Group 1 | character | Band AGE at 65 into "<65" and ">=65", intervals closed on the left. | Derived | ||
| ADVS | RACE | Race | character | Copy value from DM.RACE. | Predecessor | ||
| ADVS | VSSTRESN | Numeric Result in Standard Units | numeric | Copy value from VS.VSSTRESN. | Predecessor | ||
| ADVS | VSSTRESU | Standard Units | character | Copy value from VS.VSSTRESU. | Predecessor |
| Version | Date | Author | Description | Reviewer | Sign-off |
|---|---|---|---|---|---|
| 1.7 | 2026-10-20 | yamaa docs build | Read a specification in the 1.0 surface as its 0.5 counterpart; state that missing values stay missing where a mapping declares no missing handler, and leave out a declared missing answer that restates a handler's default | ||
| 1.6 | 2026-10-17 | yamaa docs build | Describe collected date parts written as ISO 8601 date text and times of day counted in seconds since midnight | ||
| 1.5 | 2026-10-17 | yamaa docs build | Name collected precision in words instead of letter codes; state imputation fallbacks, minimum source precision, bounds ignored outside the collected period, and invalid text with no handler as an error; describe date and datetime shifts, imputation flag codes, and partial text giving no date part | ||
| 1.4 | 2026-10-15 | yamaa docs build | State datetime precision codes through the hour and minute, and complete only the time parts a collected datetime lacks | ||
| 1.3 | 2026-09-29 | yamaa docs build | Show study codelist names, external dictionaries, and ISO 8601 formats in variable rows; list the document's codelist values and metadata | ||
| 1.2 | 2026-09-29 | yamaa docs build | Classify ADaM copies from a declared input as Predecessor and recodes as Derived, and SDTM recodes of locally derived columns as Derived | ||
| 1.1 | 2026-09-29 | yamaa docs build | Resolve lookups into the donor record they select, and give every derivation shape a plain-language rule instead of its raw YAML | ||
| 1.0 | yamaa docs build | Initial generation from spec.yaml |