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Summary
EditUnder reviewWhat this benchmark meansREADME.mdPublic entries: Python and R. Passing coverage requires an installed inventory.
Goal: submit DM with the investigator's name in a SAS transport file.
Input: one row per subject carrying the site, age, sex and investigator name, one of which is spelled with accented letters.
Variables:
SITEID,AGEandSEXare as collected.INVNAMis the investigator's name as collected.
Note: a submitted text value is printable ASCII, so the value with an accented letter stops the submission instead of being altered.
How to fix
Correct the name in the collected data to its ASCII spelling, as the investigator agrees it should be submitted, and keep the accented spelling outside the submission. Alternatively map the collected spelling explicitly:
derivation:
mapping:
source: DM_RAW.INVNAM
dict: investigator_names.yaml
Expected failure
Editthe run is rejected; no artifact is acceptedexpected/error.yaml- phase
- output
- condition
- transport_text_invalid
- rule
- XPT-7
expected/error.yaml
phase: output
condition: transport_text_invalid
spec_paths:
- datasets.DM.columns.INVNAM
rule: XPT-7
context:
dataset: DM
column: INVNAM
row: 1
value: "P\u00e9rez, Jos\u00e9"
cause: ascii
Inputs
Under review1 source fileinput/dm_raw.csv
Edit2 rows| STUDYID | USUBJID | SUBJID | SITEID | AGE | SEX | INVNAM |
|---|---|---|---|---|---|---|
| CATH | 0001 | UCSD | 34 | F | Smith, Anna | |
| CATH | 0002 | MCGILL | 67 | M | Pérez, José |
Unexpected Output
Under review2 rows presented to the failing check - not an accepted artifactexpected/dm.csv
Edit2 rows| DOMAIN | STUDYID | USUBJID | SUBJID | SITEID | AGE | SEX | INVNAM |
|---|---|---|---|---|---|---|---|
| DM | CATH | 0001 | UCSD | 34 | F | Smith, Anna | |
| DM | CATH | 0002 | MCGILL | 67 | M | Pérez, José |
Human review and assessment
| Variable Name | Variable Label | Type | Length | Controlled Terms or Format | Origin | Core | Conversion Definition | Variable Type | Variable Order | Comments for Define |
|---|---|---|---|---|---|---|---|---|---|---|
| DOMAIN | Domain Abbreviation | Char | 2 | Assigned | Req | Set constant value "DM". | SDTM | 1 | ||
| STUDYID | Study Identifier | Char | 20 | Protocol | Req | Copy value from DM_RAW.STUDYID. | SDTM | 2 | ||
| USUBJID | Unique Subject Identifier | Char | 30 | Assigned | Req | Copy value from DM_RAW.USUBJID. | SDTM | 3 | ||
| SUBJID | Subject Identifier for the Study | Char | 10 | Collected | Req | Copy value from DM_RAW.SUBJID. | SDTM | 4 | ||
| SITEID | Study Site Identifier | Char | 10 | Collected | Req | Copy value from DM_RAW.SITEID. | SDTM | 5 | ||
| AGE | Age | Num | 3 | Collected | Exp | Copy value from DM_RAW.AGE. | SDTM | 6 | ||
| SEX | Sex | Char | 1 | Collected | Req | Copy value from DM_RAW.SEX. | SDTM | 7 | ||
| INVNAM | Investigator Name | Char | 40 | Collected | Perm | Copy value from DM_RAW.INVNAM. | SDTM | 8 |
| Version | Date | Author | Description | Reviewer | Sign-off |
|---|---|---|---|---|---|
| 1.7 | 2026-10-20 | yamaa docs build | Read a specification in the 1.0 surface as its 0.5 counterpart; state that missing values stay missing where a mapping declares no missing handler, and leave out a declared missing answer that restates a handler's default | ||
| 1.6 | 2026-10-17 | yamaa docs build | Describe collected date parts written as ISO 8601 date text and times of day counted in seconds since midnight | ||
| 1.5 | 2026-10-17 | yamaa docs build | Name collected precision in words instead of letter codes; state imputation fallbacks, minimum source precision, bounds ignored outside the collected period, and invalid text with no handler as an error; describe date and datetime shifts, imputation flag codes, and partial text giving no date part | ||
| 1.4 | 2026-10-15 | yamaa docs build | State datetime precision codes through the hour and minute, and complete only the time parts a collected datetime lacks | ||
| 1.3 | 2026-09-29 | yamaa docs build | Show study codelist names, external dictionaries, and ISO 8601 formats in variable rows; list the document's codelist values and metadata | ||
| 1.2 | 2026-09-29 | yamaa docs build | Classify ADaM copies from a declared input as Predecessor and recodes as Derived, and SDTM recodes of locally derived columns as Derived | ||
| 1.1 | 2026-09-29 | yamaa docs build | Resolve lookups into the donor record they select, and give every derivation shape a plain-language rule instead of its raw YAML | ||
| 1.0 | yamaa docs build | Initial generation from spec.yaml |