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Summary

Lifecycle: draftEditUnder review
What this benchmark means
README.md

Public entries: Python and R. Passing coverage requires an installed inventory.

Goal: submit DM with the collected ethnicity in a SAS transport file.

Input: one row per subject carrying the site, age, sex and ethnicity.

Variables:

  • SITEID, AGE and SEX are as collected.
  • ETHNICITY is the collected ethnicity.

Note: a SAS transport variable name has at most eight characters, so the submission stops before any file is written; no name is shortened.

How to fix

Use the variable name the implementation guide publishes. SDTM names the collected ethnicity ETHNIC:

  - name: ETHNIC
    type: str
    label: Ethnicity
    derivation: DM_RAW.ETHNICITY

Expected failure

Edit
the run is rejected; no artifact is accepted
expected/error.yaml
phase
validation
condition
sas_name_too_long
rule
DEFINE-22
expected/error.yaml
phase: validation
condition: sas_name_too_long
spec_paths:
  - sdtm.specs[0].columns.ETHNICITY.submission
rule: DEFINE-22
context:
  name: ETHNICITY
  pattern: ^[A-Z][A-Z0-9_]{0,7}$

Inputs

Under review
1 source file

input/dm_raw.csv

Edit
2 rows
input/dm_raw.csv
STUDYIDUSUBJIDSUBJIDSITEIDAGESEXETHNICITY
CATH0001UCSD34FNOT HISPANIC OR LATINO
CATH0002UCSD67MHISPANIC OR LATINO

Unexpected Output

Under review
2 rows presented to the failing check - not an accepted artifact

expected/dm.csv

Edit
2 rows
expected/dm.csv
DOMAINSTUDYIDUSUBJIDSUBJIDSITEIDAGESEXETHNICITY
DMCATH0001UCSD34FNOT HISPANIC OR LATINO
DMCATH0002UCSD67MHISPANIC OR LATINO
Shaded columns are derived— = missing value

Human review and assessment

Your review

2 questions and your comments · View benchmark discussions

Mapping spec

Generated from the benchmark YAML; do not edit by hand

Variable NameVariable LabelTypeLengthControlled Terms or FormatOriginCoreConversion DefinitionVariable TypeVariable OrderComments for Define
DOMAINDomain AbbreviationChar2AssignedReqSet constant value "DM".SDTM1
STUDYIDStudy IdentifierChar20ProtocolReqCopy value from DM_RAW.STUDYID.SDTM2
USUBJIDUnique Subject IdentifierChar30AssignedReqCopy value from DM_RAW.USUBJID.SDTM3
SUBJIDSubject Identifier for the StudyChar10CollectedReqCopy value from DM_RAW.SUBJID.SDTM4
SITEIDStudy Site IdentifierChar10CollectedReqCopy value from DM_RAW.SITEID.SDTM5
AGEAgeNum3CollectedExpCopy value from DM_RAW.AGE.SDTM6
SEXSexChar1CollectedReqCopy value from DM_RAW.SEX.SDTM7
ETHNICITYEthnicityChar25CollectedExpCopy value from DM_RAW.ETHNICITY.SDTM8
VersionDateAuthorDescriptionReviewerSign-off
1.72026-10-20yamaa docs buildRead a specification in the 1.0 surface as its 0.5 counterpart; state that missing values stay missing where a mapping declares no missing handler, and leave out a declared missing answer that restates a handler's default
1.62026-10-17yamaa docs buildDescribe collected date parts written as ISO 8601 date text and times of day counted in seconds since midnight
1.52026-10-17yamaa docs buildName collected precision in words instead of letter codes; state imputation fallbacks, minimum source precision, bounds ignored outside the collected period, and invalid text with no handler as an error; describe date and datetime shifts, imputation flag codes, and partial text giving no date part
1.42026-10-15yamaa docs buildState datetime precision codes through the hour and minute, and complete only the time parts a collected datetime lacks
1.32026-09-29yamaa docs buildShow study codelist names, external dictionaries, and ISO 8601 formats in variable rows; list the document's codelist values and metadata
1.22026-09-29yamaa docs buildClassify ADaM copies from a declared input as Predecessor and recodes as Derived, and SDTM recodes of locally derived columns as Derived
1.12026-09-29yamaa docs buildResolve lookups into the donor record they select, and give every derivation shape a plain-language rule instead of its raw YAML
1.0yamaa docs buildInitial generation from spec.yaml