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Summary
EditUnder reviewWhat this benchmark meansREADME.mdPublic entries: Python and R. Passing coverage requires an installed inventory.
Goal: derive each subject's date of first exposure to treatment
(TRTSDT), where every subject must have received a dose.
Input: demographics, and exposure records carrying each administration's start date and dose.
Variables:
TRTSDTwould be the start date of the subject's earliest administration with a dose above zero. Every subject is required to have one, so a subject whose administrations all have a zero dose, or who has none, rejects the run with no artifact accepted, instead of leaving the date blank.
How to fix
Correct the exposure data when subject YAMAA-01-103 was dosed: its only
administration records a zero dose. If a subject without a dosed
administration is acceptable, drop require_match: true:
derivation:
source:
variable: EX.EXSTDTC
filter: "EX.EXDOSE > 0"
order_by: [EX.EXSTDTC]
keep: first
The date is then missing for such a subject, and the run counts each one under
absent. Declaring absent beside require_match: true is refused as a
contradiction.
Expected failure
Editthe run is rejected; no artifact is acceptedexpected/error.yaml- phase
- join
- condition
- unmatched_key
- rule
- LOOKUP-24
expected/error.yaml
phase: join
condition: unmatched_key
spec_paths:
- columns.TRTSDT.derivation.source
rule: LOOKUP-24
context:
intermediate: intermediate(EX)
dataset: EX
key: [STUDYID, USUBJID]
intermediate_key:
STUDYID: YAMAA-01
USUBJID: YAMAA-01-103
keys:
- STUDYID: YAMAA-01
USUBJID: YAMAA-01-103
Inputs
Under review2 source filesUnexpected Output
Under reviewNo artifact is producedNo fixture files in this directory.
Human review and assessment
| Dataset Name | Variable Name | Variable Label | Type | Codelist/Controlled Terms | Core | Computational Method | Origin |
|---|---|---|---|---|---|---|---|
| ADSL | STUDYID | Study Identifier | character | Copy value from DM.STUDYID. | Predecessor | ||
| ADSL | USUBJID | Unique Subject Identifier | character | Copy value from DM.USUBJID. | Predecessor | ||
| ADSL | TRTSDT | Date of First Exposure to Treatment | numeric | ISO 8601 | Copy value from EX.EXSTDTC where EX.EXDOSE > 0, keeping the first ordered by EX.EXSTDTC; a row with no matching record is an error. | Predecessor |
| Version | Date | Author | Description | Reviewer | Sign-off |
|---|---|---|---|---|---|
| 1.7 | 2026-10-20 | yamaa docs build | Read a specification in the 1.0 surface as its 0.5 counterpart; state that missing values stay missing where a mapping declares no missing handler, and leave out a declared missing answer that restates a handler's default | ||
| 1.6 | 2026-10-17 | yamaa docs build | Describe collected date parts written as ISO 8601 date text and times of day counted in seconds since midnight | ||
| 1.5 | 2026-10-17 | yamaa docs build | Name collected precision in words instead of letter codes; state imputation fallbacks, minimum source precision, bounds ignored outside the collected period, and invalid text with no handler as an error; describe date and datetime shifts, imputation flag codes, and partial text giving no date part | ||
| 1.4 | 2026-10-15 | yamaa docs build | State datetime precision codes through the hour and minute, and complete only the time parts a collected datetime lacks | ||
| 1.3 | 2026-09-29 | yamaa docs build | Show study codelist names, external dictionaries, and ISO 8601 formats in variable rows; list the document's codelist values and metadata | ||
| 1.2 | 2026-09-29 | yamaa docs build | Classify ADaM copies from a declared input as Predecessor and recodes as Derived, and SDTM recodes of locally derived columns as Derived | ||
| 1.1 | 2026-09-29 | yamaa docs build | Resolve lookups into the donor record they select, and give every derivation shape a plain-language rule instead of its raw YAML | ||
| 1.0 | yamaa docs build | Initial generation from spec.yaml |