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Summary
README.mdPublic entries: Python and R. Passing coverage requires an installed inventory.
Goal: derive TRT01A, the actual treatment for the first
period, as a single subject-level record from exposure records.
Input: demographics records with exposure records carrying
administered treatment (EXTRT), start date (EXSTDTC), and
sequence number (EXSEQ).
Variables:
TRT01Awould be the treatment from the chosen exposure record.
Note: the administrations are placed in start-date and sequence-number order with no statement of which end supplies the treatment, so a subject whose administrations disagree has more than one possible answer. The run is rejected before any data is read and no artifact is accepted.
How to fix
State which end of the order supplies the treatment alongside the order itself. For the earliest treatment:
intermediates:
- id: DOSING
dataset: EX
key: [STUDYID, USUBJID]
order_by: [EX.EXSTDTC, EX.EXSEQ]
keep: first
Use the latest end only when the intended result is the latest treatment.
Expected failure
Editthe run is rejected; no artifact is acceptedexpected/error.yaml- phase
- validation
- condition
- unpaired_fields
- rule
- LOOKUP-10
expected/error.yaml
phase: validation
condition: unpaired_fields
spec_paths:
- intermediates.DOSING
rule: LOOKUP-10
context:
intermediate: DOSING
declared:
- order_by
missing:
- keep
Inputs
Under review2 source filesUnexpected Output
Under reviewNo artifact is producedNo fixture files in this directory.
Human review and assessment
| Dataset Name | Variable Name | Variable Label | Type | Codelist/Controlled Terms | Core | Computational Method | Origin |
|---|---|---|---|---|---|---|---|
| ADSL | STUDYID | Study Identifier | character | Copy value from DM.STUDYID. | Predecessor | ||
| ADSL | USUBJID | Unique Subject Identifier | character | Copy value from DM.USUBJID. | Predecessor | ||
| ADSL | TRT01A | Actual Treatment for Period 01 | character | Take EXTRT from the EX record matching on STUDYID and USUBJID, ordered by EX.EXSTDTC then EX.EXSEQ, and a row with no match is an error. | Derived |
| Version | Date | Author | Description | Reviewer | Sign-off |
|---|---|---|---|---|---|
| 1.7 | 2026-10-20 | yamaa docs build | Read a specification in the 1.0 surface as its 0.5 counterpart; state that missing values stay missing where a mapping declares no missing handler, and leave out a declared missing answer that restates a handler's default | ||
| 1.6 | 2026-10-17 | yamaa docs build | Describe collected date parts written as ISO 8601 date text and times of day counted in seconds since midnight | ||
| 1.5 | 2026-10-17 | yamaa docs build | Name collected precision in words instead of letter codes; state imputation fallbacks, minimum source precision, bounds ignored outside the collected period, and invalid text with no handler as an error; describe date and datetime shifts, imputation flag codes, and partial text giving no date part | ||
| 1.4 | 2026-10-15 | yamaa docs build | State datetime precision codes through the hour and minute, and complete only the time parts a collected datetime lacks | ||
| 1.3 | 2026-09-29 | yamaa docs build | Show study codelist names, external dictionaries, and ISO 8601 formats in variable rows; list the document's codelist values and metadata | ||
| 1.2 | 2026-09-29 | yamaa docs build | Classify ADaM copies from a declared input as Predecessor and recodes as Derived, and SDTM recodes of locally derived columns as Derived | ||
| 1.1 | 2026-09-29 | yamaa docs build | Resolve lookups into the donor record they select, and give every derivation shape a plain-language rule instead of its raw YAML | ||
| 1.0 | yamaa docs build | Initial generation from spec.yaml |
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