Review ask

As a clinical trial statistician or programmer, challenge anything in this benchmark: describe a problem in Comments, or propose a fix with the Edit button on any source file.

  1. Task: Would a real study need this derivation, specified this way? Does it follow CDISC ADaM: variable names, controlled terms, record structure? Flag any rule that is ambiguous or that a sponsor would handle differently.
  2. Inputs: Do they look like data collected in a real trial, and do they include the situations you would expect to meet in one?
  3. Expected output: Would independent QC programming reproduce every value from these inputs and rules?

The other tabs beside Comments are background for assessment, not under review.

Summary

Lifecycle: draftEditUnder review
What this benchmark means
README.md

Goal: build RND1 and RND0 by rounding collected values, with halfway values moving away from zero.

Input: collected analysis values placed at, just below, and clear of halfway marks.

Variables:

  • VAL1: the unrounded value feeding the one-decimal-place result; empty when the value was not recorded.
  • VAL0: the unrounded value feeding the whole-number result; empty when the value was not recorded.
  • RND1: VAL1 rounded to one decimal place; a value exactly halfway between two candidates moves away from zero.
  • RND0: VAL0 rounded to a whole number; a value exactly halfway between two candidates moves away from zero.

Note: a value just short of a halfway mark still counts as a tie -- and still moves away from zero -- when it falls within the rule's small binary tolerance below the mark; further below, the value rounds to the nearer candidate. A result that would print as negative zero is written as zero, and a missing input stays missing.

Inputs

Under review
1 source file

input/adsl.csv

Edit
16 rows
input/adsl.csv
STUDYIDUSUBJIDVAL1VAL0
YAMAA-012.45—
YAMAA-01-2.45—
YAMAA-012.41—
YAMAA-012.449999999—
YAMAA-012.44999999—
YAMAA-01-2.449999999—
YAMAA-01-2.44999999—
YAMAA-01-0.04—
YAMAA-01——
YAMAA-01—2.5
YAMAA-01—-2.5
YAMAA-01—2.4
YAMAA-01—2.4999999999
YAMAA-01—2.4999999
YAMAA-01—-2.4999999999
YAMAA-01—-0.4

Expected output

Under review
16 expected rows

expected/adsl.csv

Edit
16 rows
expected/adsl.csv
STUDYIDUSUBJIDVAL1VAL0RND1RND0
YAMAA-012.45—2.5—
YAMAA-01-2.45—-2.5—
YAMAA-012.41—2.4—
YAMAA-012.449999999—2.5—
YAMAA-012.44999999—2.4—
YAMAA-01-2.449999999—-2.5—
YAMAA-01-2.44999999—-2.4—
YAMAA-01-0.04—0—
YAMAA-01————
YAMAA-01—2.5—3
YAMAA-01—-2.5—-3
YAMAA-01—2.4—2
YAMAA-01—2.4999999999—3
YAMAA-01—2.4999999—2
YAMAA-01—-2.4999999999—-3
YAMAA-01—-0.4—0
Shaded columns are derived— = missing value

Comments and assessment materials

Comments

Signed in with GitHub; saved in repository Discussions

Mapping spec

Generated from the benchmark YAML; do not edit by hand

Dataset NameVariable NameVariable LabelTypeCodelist/Controlled TermsCoreComputational MethodOrigin
ADSLSTUDYIDStudy IdentifiercharacterCopy value from SOURCE.STUDYID.Predecessor
ADSLUSUBJIDUnique Subject IdentifiercharacterCopy value from SOURCE.USUBJID.Predecessor
ADSLVAL1Source Value for One-Decimal RoundingnumericCopy value from SOURCE.VAL1.Predecessor
ADSLVAL0Source Value for Whole-Number RoundingnumericCopy value from SOURCE.VAL0.Predecessor
ADSLRND1Value Rounded to One Decimal PlacenumericRound VAL1 to 1 decimal place, ties away from zero.Derived
ADSLRND0Value Rounded to a Whole NumbernumericRound VAL0 to 0 decimal places, ties away from zero.Derived
VersionDateAuthorDescriptionReviewerSign-off
1.32026-09-29yamaa docs buildShow study codelist names, external dictionaries, and ISO 8601 formats in variable rows; list the document's codelist values and metadata
1.22026-09-29yamaa docs buildClassify ADaM copies from a declared input as Predecessor and recodes as Derived, and SDTM recodes of locally derived columns as Derived
1.12026-09-29yamaa docs buildResolve lookups into the donor record they select, and give every derivation shape a plain-language rule instead of its raw YAML
1.0yamaa docs buildInitial generation from spec.yaml

yamaa code

Runs the yamaa specification; its result must match the expected output

run.R

Edit
4 lines
library(yamaa)adsl <- yamaa_domain("spec.yaml")$outputadsl

run.py

Edit
4 lines
import yamaaadsl = yamaa.domain("spec.yaml").outputadsl