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Summary

Lifecycle: draftEditUnder review
What this benchmark means
README.md

Public entries: Python and R. Passing coverage requires an installed inventory.

Goal: carry the date of birth (BRTHDT) into ADSL and submit it as the SAS transport file adsl.xpt, in which an analysis date is a SAS date.

Input: one pre-analysis row per subject carrying the collected date of birth; one was entered as 12 June 1498 instead of 1948.

Variables:

  • BRTHDT is the subject's date of birth as collected.

A SAS date counts days from 1 January 1960, and SAS dates begin on 1 January 1582, so a transport file cannot carry 1498-06-12. Writing any other date in its place would change a recorded value, so the submission is rejected before any file is written.

How to fix

Query the site and correct the year at the source, then build the dataset again:

STUDYID,USUBJID,BRTHDTC
CATH,CATH-UCSD-0001,1958-03-14
CATH,CATH-UCSD-0002,1948-06-12
CATH,CATH-MCGILL-0003,1972-11-30

Expected failure

Edit
the run is rejected; no artifact is accepted
expected/error.yaml
phase
output
condition
xpt_value_out_of_range
rule
XPT-8
expected/error.yaml
phase: output
condition: xpt_value_out_of_range
spec_paths:
  - datasets.ADSL.columns.BRTHDT
rule: XPT-8
context:
  dataset: ADSL
  column: BRTHDT
  row: 1
  cause: date

Inputs

Under review
1 source file

input/adsl_raw.csv

Edit
3 rows
input/adsl_raw.csv
STUDYIDUSUBJIDBRTHDTC
CATH1958-03-14
CATH1498-06-12
CATH1972-11-30

Unexpected Output

Under review
3 rows presented to the failing check - not an accepted artifact

expected/adsl.csv

Edit
3 rows
expected/adsl.csv
STUDYIDUSUBJIDBRTHDT
CATH1958-03-14
CATH1498-06-12
CATH1972-11-30
Shaded columns are derived— = missing value

Human review and assessment

Your review

2 questions and your comments · View benchmark discussions

Mapping spec

Generated from the benchmark YAML; do not edit by hand

Dataset NameVariable NameVariable LabelTypeCodelist/Controlled TermsCoreComputational MethodOrigin
ADSLSTUDYIDStudy IdentifiercharacterReqCopy value from ADSL_RAW.STUDYID.Predecessor
ADSLUSUBJIDUnique Subject IdentifiercharacterReqCopy value from ADSL_RAW.USUBJID.Predecessor
ADSLBRTHDTDate of BirthnumericISO 8601PermCopy value from ADSL_RAW.BRTHDTC.Predecessor
VersionDateAuthorDescriptionReviewerSign-off
1.72026-10-20yamaa docs buildRead a specification in the 1.0 surface as its 0.5 counterpart; state that missing values stay missing where a mapping declares no missing handler, and leave out a declared missing answer that restates a handler's default
1.62026-10-17yamaa docs buildDescribe collected date parts written as ISO 8601 date text and times of day counted in seconds since midnight
1.52026-10-17yamaa docs buildName collected precision in words instead of letter codes; state imputation fallbacks, minimum source precision, bounds ignored outside the collected period, and invalid text with no handler as an error; describe date and datetime shifts, imputation flag codes, and partial text giving no date part
1.42026-10-15yamaa docs buildState datetime precision codes through the hour and minute, and complete only the time parts a collected datetime lacks
1.32026-09-29yamaa docs buildShow study codelist names, external dictionaries, and ISO 8601 formats in variable rows; list the document's codelist values and metadata
1.22026-09-29yamaa docs buildClassify ADaM copies from a declared input as Predecessor and recodes as Derived, and SDTM recodes of locally derived columns as Derived
1.12026-09-29yamaa docs buildResolve lookups into the donor record they select, and give every derivation shape a plain-language rule instead of its raw YAML
1.0yamaa docs buildInitial generation from spec.yaml